David Baker

31 articles listing David Baker in Nature, PNAS, Nature Communications, Science, indexed by Paperzzz from Crossref and OSF.

De novo design of RNA pseudoknots with deep learning Science
Accelerating protein design by scaling experimental characterization Nature Communications
Pan-Ebolavirus nanoparticle vaccine provides protection in rodents from lethal infection by Zaire and Sudan viruses Nature Communications
De novo design of orthogonal far-red, orange, and green fluorophore-binding proteins for multiplexed imaging Science
Membrane protein solubilization and structure determination using de novo–designed proteins Science
Author Correction: De novo design of quasisymmetric two-component protein cages Nature
De novo design of quasisymmetric two-component protein cages Nature
Design of one-component quasisymmetric protein nanocages Nature
De novo design of a macrocycle-induced dimerization system for cellular control Nature Communications
The past, present and future of de novo protein design Nature
Small-molecule binding and sensing with a designed protein family Nature Communications
Impact of solvent forces and broken symmetry on the assembly of designed proteins at a liquid-solid interface Nature Communications
Genetically encoded assembly recorder temporally resolves cellular history Nature
LetA defines a structurally distinct transporter family Nature
Improved protein binder design using β-pairing targeted RFdiffusion Nature Communications
Design of solubly expressed miniaturized SMART MHCs PNAS
Computational design of metallohydrolases Nature
Inhibition of ice recrystallization with designed twistless helical repeat proteins PNAS
Atomically accurate de novo design of antibodies with RFdiffusion Nature
Modeling protein–small molecule conformational ensembles with PLACER PNAS
Bottom-up design of Ca2+ channels from defined selectivity filter geometry Nature
Predicting protein-protein interactions in the human proteome Science
Design of facilitated dissociation enables timing of cytokine signalling Nature
De novo design of potent inhibitors of clostridial family toxins PNAS
Parametrically guided design of beta barrels and transmembrane nanopores using deep learning PNAS
Computational design of potent and selective binders of BAK and BAX Science Advances
Diffusing protein binders to intrinsically disordered proteins Nature
Design of high-specificity binders for peptide–MHC-I complexes Science
Design of intrinsically disordered region binding proteins Science
Solution mapping of MHC-I:TCR interactions using a minimalistic protein system PNAS
Proofreading and single-molecule sensitivity in T cell receptor signaling by condensate nucleation PNAS